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vep

The Variant Effect Predictor predicts the functional effects of genomic variants

Versions:89.7
License:GPLv2
Categories:bioinformatics
vim

Vim is a text editor

Versions:8.1
Categories:Text editor
virsorter

VirSorter: mining viral signal from microbial genomic data

Versions:1.0.3
License:GPL2
Categories:bioinformatics genomic virus microbe
vsearch

We have implemented a tool called VSEARCH which supports de novo and reference based chimera detection, clustering, full-length and prefix dereplication, reverse complementation, masking, all-vs-all pairwise global alignment, exact and global alignment searching, shuffling, subsampling and sorting. It also supports FASTQ file analysis, filtering and conversion.

Versions:2.0.2
License:GNU GPL v3 or under the BSD 2-clause license
Categories:Metagenomics, bioinformatics
vt

a variant tool set that discovers short variants from Next Generation Sequencing data

Versions:0.57
License:GPLv2
Categories:bioinformatics
wannier90

Maximally-localised Wannier functions (MLWFs) and Wannier90

Versions:2.0.0; 2.0.1; 1.2
License:http://www.wannier.org
Categories:MLWFs, electronic structure code
wcstools

WCSTools is a package of programs and a library of utility subroutines for setting and using the world coordinate systems (WCS) in the headers of the most common astronomical image formats, FITS and IRAF .imh, to relate image pixels to sky coordinates.

Versions:3.9.3
License:GNU GPL
Categories:FITS, IRAF, WCS, Woorld Coordinate System
wdfs

wdfs is a webdav filesystem that makes it possible to mount a webdav share under linux.

Versions:1.4.2.p1
Categories:
weblogo

WebLogo is a web based application designed to make the generation of sequence logos as easy and painless as possible.

Versions:2.8.2
License:GPLv2
Categories:bioinformatics
wget

GNU Wget is a free software package for retrieving files using HTTP, HTTPS, FTP and FTPS the most widely-used Internet protocols.

Versions:1.19
License:GPL, https://www.gnu.org/copyleft/gpl.html
Categories:Utility, download, ftp, ftps, http, https, web
wgs-assembler

Celera Assembler is a de novo whole-genome shotgun (WGS) DNA sequence assembler.

Versions:8.3
License:GNU GPL v2
Categories:Celera, Sequencing, bioinformatics
WIEN2k

WEIN2k DFT electronic structural calculations

Versions:17.1
License:Academic
Categories:materials science
wigToBigWig

The wigToBigWig program converts a ‘wig’ file to ‘bigWig’ format.

Versions:4.0.0
License:GPLv3
Categories:bioinformatics
wine32

Wine is a compatability layer capable of running Windows apps on unix systems.

Versions:3.0.3
Categories:
wise2

Wise2 includes genewise, a program for aligning proteins or protein HMMs to DNA, and dynamite a rather cranky “macro language”” which automates the production of dynamic programming. “

Versions:2.4.1
License:GNU GPL
Categories:bioinformatics
wrf

The Weather Research and Forecasting (WRF) Model is atmospheric modeling system designed for both meteorological research and numerical weather prediction.

Versions:3.8
License:http://www2.mmm.ucar.edu/wrf/users/public.html
Categories:Weather Forecasting, atmospheric modeling, meteorology
wrf-hydro

The WRF-Hydro modeling system provides a means to couple hydrological model components to atmospheric models and other Earth System modeling architectures

Versions:5.0.3
License:https://ral.ucar.edu/projects/wrf_hydro/terms-of-use
Categories:Weather Forecasting, atmospheric modeling, meteorology
xcrysden

XCrySDen is a molecular/crystal structure visualization program.

Versions:1.5.60
License:http://www.xcrysden.org/License.html
Categories:crystal symmetries, electronic structure, vizualization
xerces-c

xerces-c parses XML

Versions:3.1.3; 3.2.0
License:Apache 2.0
Categories:Development
xmakemol

xmakemol is a molecular/crystal structure visualization program.

Versions:5.16
License:Electronic Structure, crystal symmetries, vizualization
Categories:
XQilla

XQilla is an XQuery and XPath library and command line utility

Versions:2.3.3
License:Apache 2.0
Categories:Development
yasm

Yasm assembler.

Versions:1.3.0
License:https://github.com/yasm/yasm/blob/master/BSD.txt
Categories:Programming, assembler
Current page: 13
Total pages: 13
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